Data on PCR primer design for glucose 6-phosphate dehydrogenase gene and the effects of dietary carbohydrate levels on its expression in the liver of Malaysian mahseer.

Data on PCR primer design for glucose 6-phosphate dehydrogenase gene and the effects of dietary carbohydrate levels on its expression in the liver of Malaysian mahseer.

The enzyme glucose-6-phosphate dehydrogenase (G6PD) catalyses the metabolite glucose-6-phosphate in producing NADPH throughout the first part of pentose-phosphate pathway thus gives decreasing energy to all cells for mobile development, antioxidant defence, and biosynthetic reactions in all dwelling organism.

The deliberate inclusion of starch as carbohydrate supply in business feed nonetheless might have an effect on the G6PD hepatic exercise in cultured fish. We designed a set of primers to focus on G6PD gene within the well-liked Malaysian aquaculture species, Tor tambroides. For this dataset, the molecular traits of obtained T. tambroides G6PD (TtG6PD) nucleotide sequence was analysed utilizing a number of alignments and phylogenetic analyses of the deduced amino acids. The set of primers obtained had been then utilized in a examine to judge the impact of various dietary carbohydrate inclusion ranges on the hepatic TtG6PD mRNA expression of the T. tambroides fingerlings.

4 teams of fish got a dietary remedy of 15%, 20%, 25% and 30% starch on the optimum inclusion stage of 23.4% for 10 weeks. The TtG6PD mRNA transcripts had been measured utilizing real-time-PCR assays and its expression normalized towards β-actin, which acts as the inner management gene.

This text gives supportive information in relation between hepatic TtG6PD mRNA gene expression in T. tambroides and the way it’s influenced by its dietary carbohydrate consumption. These information can even help in additional dietary genomic research of carbohydrate and power utilization for all species within the mahseer household.

Primer design for quantitative real-time PCR for the rising Coronavirus SARS-CoV-2

In December 2019, a brand new coronavirus illness (COVID-19) outbreak occurred in Wuhan, China. Extreme acute respiratory syndrome-coronavirus-2 (SARS-CoV-2), which is the seventh coronavirus identified to contaminate people, is extremely contagious and has quickly expanded worldwide since its discovery.

Quantitative nucleic acid testing has turn out to be the gold normal for analysis and guiding scientific selections concerning the usage of antiviral remedy. Nonetheless, the RT-qPCR assays concentrating on SARS-CoV-2 have various challenges, particularly by way of primer design. Primers are the pivotal elements of a RT-qPCR assay. As soon as virus mutation and recombination happen, it’s tough to successfully diagnose viral an infection by current RT-qPCR primers. Some primers and probes have additionally been made obtainable on the WHO web site for reference.

Data on PCR primer design for glucose 6-phosphate dehydrogenase gene and the effects of dietary carbohydrate levels on its expression in the liver of Malaysian mahseer.

Nonetheless, no earlier assessment has systematically in contrast the beforehand reported primers and probes and described tips on how to design new primers within the occasion of a brand new coronavirus an infection.

This assessment focuses on how primers and probes could be designed methodically and rationally, and the way the sensitivity and specificity of the detection course of could be improved. This transient assessment shall be helpful for the correct analysis and well timed remedy of the brand new coronavirus pneumonia.

EasyPrimer: user-friendly instrument for pan-PCR/HRM primers design. Improvement of an HRM protocol on wzi gene for quick Klebsiella pneumoniae typing.

On this work we current EasyPrimer, a user-friendly on-line instrument developed to help pan-PCR and Excessive Decision Melting (HRM) primer design. The instrument finds essentially the most appropriate areas for primer design in a gene alignment and returns a transparent graphical illustration of their positions on the consensus sequence.

EasyPrimer is especially helpful in tough contexts, e.g. on gene alignments of tons of of sequences and/or on extremely variable genes. HRM evaluation is an rising methodology for quick and value saving bacterial typing and an HRM scheme of six primer pairs on 5 Multi-Locus Sequence Kind (MLST) genes is already obtainable for Klebsiella pneumoniae.

We validated the instrument designing a scheme of two HRM primer pairs on the hypervariable gene wzi of Klebsiella pneumoniae and in contrast the 2 schemes. The wzi scheme resulted to have a discriminatory energy akin to the HRM MLST scheme, utilizing just one third of primer pairs.

Then we efficiently used the wzi HRM primer scheme to reconstruct a Klebsiella pneumoniae nosocomial outbreak in few hours. The usage of hypervariable genes reduces the variety of HRM primer pairs required for bacterial typing permitting to carry out price saving, large-scale surveillance applications.

ampPD: An Automated PrimerDesign Device for Extremely Multiplexed, Single-Tube Tiled Amplicon PCR for Resequencing of Tumor Samples.

PCR-based goal enrichment is extensively used to arrange libraries for subsequent technology sequencing (NGS). Amplicon tiling is commonly used for assay design however may end up in amplicon overlap that reduces assay sensitivity. Pillar Biosciences™ SLIMamp® enrichment expertise permits environment friendly amplicon tiling even with overlapping amplicons. Right here, we current an automatic primer design instrument (ampPD) for amplicon tiling and consider the efficiency of an assay designed towards the TP53 tumor suppressor gene. The ampPD workflow contains goal preparation, candidate primer technology, primer choice and pooling.

All 11 TP53 coding exons had been focused for amplification and efficiency of the assay design was evaluated by synthesizing and pooling the ampPD output primers to arrange SLIMamp libraries from 10ng, 5ng and 1ng enter DNA from FFPE tumor samples. Ensuing libraries had been normalized, pooled and sequenced on an Illumina MiSeq. Automated TP53 primer design generated an preliminary pool of 627 suitable primers that was diminished to an optimized pool of 19 amplicons, of which 16 amplicons had been overlapping. The whole design took roughly 10 seconds to finish.

The assay displayed excessive protection uniformity, with 100% of focused based mostly coated >0.2x imply protection for all samples. For the 5ng and 10ng samples, variant detection was extremely reproducible and 100% concordant with identified end result and a median 86% on-target fee. For the 1ng samples, all constructive variants had been detected however with elevated background noise and a decrease median on-target fee. The ampPD instrument is a fast and sturdy primer design pipeline for amplicon tiling assays. Utilizing TP53 as a mannequin, the ensuing primers supplied uniform protection and delicate variant detection at FFPE-derived DNA inputs >1ng.

AceQ qPCR SYBR® Green Master Mix

Q111-02 500 rxn (20 μl/rxn)
EUR 265.2

AceQ qPCR SYBR® Green Master Mix

Q111-03 2500 rxn (20 μl/rxn)
EUR 775.2

2x SYBR Green qPCR Master Mix (High ROX)

B21402 5 ml
EUR 268.8
Description: 2x SYBR Green qPCR master mix (High ROX) utilizes a special performance-enhanced Taq DNA polymerase protected via a hot-start activation technique, and optimized qPCR buffer system to perform SYBR

2x SYBR Green qPCR Master Mix (High ROX)

B21403 25 ml
EUR 1027.2
Description: 2x SYBR Green qPCR master mix (High ROX) utilizes a special performance-enhanced Taq DNA polymerase protected via a hot-start activation technique, and optimized qPCR buffer system to perform SYBR

2x SYBR Green qPCR Master Mix (Low ROX)

B21702 5 ml
EUR 268.8
Description: 2x SYBR Green qPCR master mix (Low ROX) utilizes a special performance-enhanced Taq DNA polymerase protected via a hot-start activation technique, and optimized qPCR buffer system to perform SYBR

2x SYBR Green qPCR Master Mix (Low ROX)

B21703 25 ml
EUR 1027.2
Description: 2x SYBR Green qPCR master mix (Low ROX) utilizes a special performance-enhanced Taq DNA polymerase protected via a hot-start activation technique, and optimized qPCR buffer system to perform SYBR

AceQ Universal SYBR qPCR Master Mix

Q511-02 500 rxn (20 μl/rxn)
EUR 265.2

AceQ Universal SYBR qPCR Master Mix

Q511-03 2500 rxn (20 μl/rxn)
EUR 775.2

ChamQ Universal SYBR qPCR Master Mix

Q711-02 500 rxn (20 μl/rxn)
EUR 265.2

ChamQ Universal SYBR qPCR Master Mix

Q711-03 2500 rxn (20 μl/rxn)
EUR 775.2

miRNA Universal SYBR® qPCR Master Mix

MQ101-01 125 rxn(20 μl/rxn)
EUR 165.6

miRNA Universal SYBR® qPCR Master Mix

MQ101-02 500 rxn(20 μl/rxn)
EUR 290.4

2X Universal SYBR Green Fast qPCR Mix

RK21203 1 mL Ask for price

Genious 2X SYBR Green Fast qPCR Mix

RK21204 1 mL Ask for price

Genious 2X SYBR GREEN FAST qPCR MIX (No ROX)

RK21205 1 ml Ask for price

RT Master Mix for qPCR

HY-K0510 1 mL (100 rxns)
EUR 349.2

AceQ qPCR Probe Master Mix

Q112-02 500 rxn (20 μl/rxn)
EUR 265.2

AceQ qPCR Probe Master Mix

Q112-03 2500 rxn (20 μl/rxn)
EUR 775.2

Entrans 2X qPCR Probe Master Mix

RK21208 40 RXN Ask for price

TAQuest™ qPCR Master Mix with Helixyte™ Green *No ROX*

17270 1 mL
EUR 99

TAQuest™ qPCR Master Mix with Helixyte™ Green *No ROX*

17271 5 mL
EUR 308

TAQuest™ qPCR Master Mix with Helixyte™ Green *Low ROX*

17272 1 mL
EUR 99

TAQuest™ qPCR Master Mix with Helixyte™ Green *Low ROX*

17273 5 mL
EUR 308

TAQuest™ qPCR Master Mix with Helixyte™ Green *High ROX*

17274 1 mL
EUR 99

TAQuest™ qPCR Master Mix with Helixyte™ Green *High ROX*

17275 5 mL
EUR 308

amfiSure Ultra Fidelity PCR Master Mix(2X)

P0346-001 1ml
EUR 336

amfiSure Ultra Fidelity PCR Master Mix(2X)

P0346-002 2x1ml
EUR 578.4

amfiSure Ultra Fidelity PCR Master Mix(2X)

P0346-005 5x1ml
EUR 993.6

amfiSure Ultra Fidelity PCR Master Mix(2X)

P0346-010 10x1ml
EUR 1632

lyophilised real-time PCR Master Mix with SYBR® Green fluorescent DNA stain

M-PCR-173L 960 reactions x 20 µl
EUR 789.36
Description: lyophilised real-time PCR Master Mix with SYBR® Green fluorescent DNA stain

lyophilised real-time PCR Master Mix with SYBR® Green fluorescent DNA stain

M-PCR-173S 192 reactions x 20 µl
EUR 197.34
Description: lyophilised real-time PCR Master Mix with SYBR® Green fluorescent DNA stain

TAQuest™ FAST qPCR Master Mix with Helixyte™ Green *No ROX*

17276 1 mL
EUR 99

TAQuest™ FAST qPCR Master Mix with Helixyte™ Green *No ROX*

17277 5 mL
EUR 308

TAQuest™ FAST qPCR Master Mix with Helixyte™ Green *Low ROX*

17278 1 mL
EUR 99

TAQuest™ FAST qPCR Master Mix with Helixyte™ Green *Low ROX*

17279 5 mL
EUR 308

TAQuest™ FAST qPCR Master Mix with Helixyte™ Green *High ROX*

17280 1 mL
EUR 99

TAQuest™ FAST qPCR Master Mix with Helixyte™ Green *High ROX*

17281 5 mL
EUR 308

HotStart PCR Master mix (2X, Green Dye)

BS9291 5X1mL, 5ml
EUR 251.4

HotStart PCR Master mix (2X, Green Dye)

BS9292 1ml
EUR 115.68

PLATEMAX ULTRA CLEAR PERMANENT HEAT SEALING FILM FOR QPCR, 100/500

HS-100-QPCR 100/pk
EUR 381.6
Description: Sealing Products; Sealing films - Axygen

PLATEMAX ULTRA CLEAR PEELABLE HEAT SEALING FILM FOR QPCR. 100/500

HS-150-QPCR 100/pk
EUR 381.6
Description: Sealing Products; Sealing films - Axygen

SYBR Green I

B1747-25
EUR 1396.8

SYBR Green I

B1747-5
EUR 464.4

Fast EvaGreen Master Mix for qPCR(200 rxn)

31003 2x1ML
EUR 244.8
Description: Minimum order quantity: 1 unit of 2x1ML

Fast EvaGreen Master Mix for qPCR (500 rxn)

31003-1 5x1ML
EUR 463.2
Description: Minimum order quantity: 1 unit of 5x1ML

Fast EvaGreen Master Mix for qPCR (5000 rxn)

31003-2 50x1ML
EUR 3739.2
Description: Minimum order quantity: 1 unit of 50x1ML

Fast Plus EvaGreen qPCR Master Mix (200 rxn)

31020 2x1mL
EUR 273.6
Description: Minimum order quantity: 1 unit of 2x1mL

Fast Plus EvaGreen qPCR Master Mix (500 rxn)

31020-1 5x1mL
EUR 524.4
Description: Minimum order quantity: 1 unit of 5x1mL

Fast Plus EvaGreen qPCR Master Mix (5000 rxn)

31020-2 50x1mL
EUR 4291.2
Description: Minimum order quantity: 1 unit of 50x1mL

Genorise® 2 x qPCR HotStart Master Mix

GR108002 2.0 ml
EUR 334.8

RT Master Mix for qPCR (gDNA digester plus)

HY-K0511 1 mL (100 rxns)
EUR 378

ABScript II One Step SYBR Green RT-qPCR Kit

RK20404 10 RXN Ask for price

Jade? Master Mix

M1105-500
EUR 529.2

Taqman Master Mix

M1121-500
EUR 529.2

Forget-Me-Notâ„¢ EvaGreen qPCR Master Mix (500 reactions)

31041-1 5x1mL
EUR 326.4
Description: Minimum order quantity: 1 unit of 5x1mL

Forget-Me-Notâ„¢ EvaGreen qPCR Master Mix (2000 reactions)

31041-20mL 2x10mL
EUR 592.8
Description: Minimum order quantity: 1 unit of 2x10mL

Forget-Me-Notâ„¢ EvaGreen qPCR Master Mix (100 reactions)

31041-T 1mL
EUR 136.8
Description: Minimum order quantity: 1 unit of 1mL

EZSolution? SYBR Green I

B1748-1
EUR 744

EZSolution? SYBR Green I

B1748-500
EUR 516

OPTIONAL GREEN FILTER (572NM)

GDBL-GREEN 1/pk
EUR 1262.4
Description: Lab Equipment; Axygen Branded EQ

Fast EvaGreen Master Mix for qPCR, trial size (100 rxn)

31003-T 1ML
EUR 147.6
Description: Minimum order quantity: 1 unit of 1ML

Fast Plus EvaGreen qPCR Master Mix (trial size, 100 rxn)

31020-T 1mL
EUR 160.8
Description: Minimum order quantity: 1 unit of 1mL

TAQuest™ qPCR Master Mix for TaqMan Probes *No ROX*

17282 1 mL
EUR 99

TAQuest™ qPCR Master Mix for TaqMan Probes *No ROX*

17283 5 mL
EUR 308

TAQuest™ qPCR Master Mix for TaqMan Probes *Low ROX*

17284 1 mL
EUR 99

TAQuest™ qPCR Master Mix for TaqMan Probes *Low ROX*

17285 5 mL
EUR 308

TAQuest™ qPCR Master Mix for TaqMan Probes *High ROX*

17286 1 mL
EUR 99

TAQuest™ qPCR Master Mix for TaqMan Probes *High ROX*

17287 5 mL
EUR 308

Taqman Master Mix-iCycler

M1122-500
EUR 529.2

Taqman Master Mix-ROX

M1124-500
EUR 529.2

Taqman Master Mix-Multiplex

M1125-500
EUR 529.2

amfiSure PCR Master Mix

P0311-010 2x50 rxns
EUR 151.2

amfiSure PCR Master Mix

P0311-025 5X50 rxns
EUR 198

amfiSure PCR Master Mix

P0311-050 10X50 rxns
EUR 262.8

amfiSure PCR Master Mix

P0311-100 10x1ml
EUR 343.2

amfiSure PCR Master Mix

P0311-125 15X50 rxns
EUR 333.6

amfiSure PCR Master Mix

P0311-200 20x1ml
EUR 562.8

amfiSure PCR Master Mix

P0311-250 50x50 rxns
EUR 902.4

amfiSure PCR Master Mix

P0311-500 100x50 rxns
EUR 1509.6

amfiXpand PCR Master Mix

P0331-010 2X50 rxns
EUR 181.2

amfiXpand PCR Master Mix

P0331-025 5X50 rxns
EUR 327.6

amfiXpand PCR Master Mix

P0331-050 10X50 rxns
EUR 537.6

amfiXpand PCR Master Mix

P0331-250 50x50 rxns
EUR 2247.6

2 × Taq Master Mix

P111-01 5 ml
EUR 140.4

2 × Taq Master Mix

P111-02 15 ml
EUR 175.2

2 × Taq Master Mix

P111-03 50 ml
EUR 283.2

2 × AceTaq Master Mix

P411-01 1 ml
EUR 142.8

2 × AceTaq Master Mix

P411-02 5 ml
EUR 189.6

2 × AceTaq Master Mix

P411-03 15 ml
EUR 314.4

Accuris Taq Master Mix

PR1001-1000 1 PC
EUR 360.31

Accuris Taq Master Mix

PR1001-200 1 PC
EUR 145.94

Accuris Taq Master Mix

PR1001-S 1 PC
EUR 83.75

Green qPCR SuperMix

20-abx098031
  • EUR 1245.60
  • EUR 526.80
  • EUR 760.80
  • 15 ml
  • 1 ml
  • 5 ml

Green Taq Mix

P131-01 5 ml
EUR 142.8

Green Taq Mix

P131-02 15 ml
EUR 180

Green Taq Mix

P131-03 50 ml
EUR 297.6

CytoTrace™ Ultra Green

21800 1 mg
EUR 278

Fast Plus EvaGreen Master Mix for qPCR with Rox (200 rxn)

31014 2x1mL
EUR 273.6
Description: Minimum order quantity: 1 unit of 2x1mL

Fast Plus EvaGreen qPCR Master Mix with low Rox (500 rxn)

31014-1 5x1mL
EUR 524.4
Description: Minimum order quantity: 1 unit of 5x1mL

Fast Plus EvaGreen qPCR Master Mix with low Rox (5000 rxn)

31014-2 50x1mL
EUR 4291.2
Description: Minimum order quantity: 1 unit of 50x1mL

Fast Plus EvaGreen qPCR Master Mix with high Rox (500 rxn)

31015-1 5x1mL
EUR 524.4
Description: Minimum order quantity: 1 unit of 5x1mL

Fast Plus EvaGreen qPCR Master Mix with high Rox (5000 rxn)

31015-2 50x1mL
EUR 4291.2
Description: Minimum order quantity: 1 unit of 50x1mL

Forget-Me-Notâ„¢ EvaGreen qPCR Master Mix with ROX (500 reactions)

31042-1 5x1mL
EUR 326.4
Description: Minimum order quantity: 1 unit of 5x1mL

Forget-Me-Notâ„¢ EvaGreen qPCR Master Mix with ROX (200 reactions)

31042-20mL 2x10mL
EUR 592.8
Description: Minimum order quantity: 1 unit of 2x10mL

Forget-Me-Notâ„¢ EvaGreen qPCR Master Mix with ROX (100 reactions)

31042-T 1mL
EUR 136.8
Description: Minimum order quantity: 1 unit of 1mL

Forget-Me-Notâ„¢ EvaGreen qPCR Master Mix (Low ROX) (500 reactions)

9-31045
  • EUR 136.80
  • EUR 578.40
  • EUR 319.20
  • 1mL
  • 1X10mL
  • 5x1mL
Description: Minimum order quantity: 1 unit of 5x1mL

Forget-Me-Notâ„¢ EvaGreen qPCR Master Mix (High ROX) (500 reactions)

9-31046
  • EUR 136.80
  • EUR 578.40
  • EUR 319.20
  • 1mL
  • 1X10mL
  • 5x1mL
Description: Minimum order quantity: 1 unit of 5x1mL

qPCR Master Mix DLP1 (SafeLine: dUTP), packed in 1,25 ml vials

S190 100 rcs (2,5 ml)
EUR 165.6

qPCR Master Mix DLP1 (SafeLine: dUTP), packed in 1,25 ml vials

S190L 500 rcs (12,5 ml)
EUR 627.6

TAQuest™ FAST qPCR Master Mix for TaqMan Probes *No ROX*

17288 1 mL
EUR 99

TAQuest™ FAST qPCR Master Mix for TaqMan Probes *No ROX*

17289 5 mL
EUR 308

TAQuest™ FAST qPCR Master Mix for TaqMan Probes *Low ROX*

17290 1 mL
EUR 99

TAQuest™ FAST qPCR Master Mix for TaqMan Probes *Low ROX*

17291 5 mL
EUR 308

TAQuest™ FAST qPCR Master Mix for TaqMan Probes *High ROX*

17292 1 mL
EUR 99

TAQuest™ FAST qPCR Master Mix for TaqMan Probes *High ROX*

17293 5 mL
EUR 308

qPCR SybrMasterMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

M-PCR-372L 10 x 1,25 ml
EUR 720.29
Description: qPCR SybrMasterMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

qPCR SybrMasterMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

M-PCR-372S 2 x 1,25 ml
EUR 180.14
Description: qPCR SybrMasterMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

Volatile Organics Mix

60-BIG-MIX 1ML
EUR 120.84

5 Component Mix

AOAC-MIX-1 EACH
EUR 117.42

qPCR SybrMaster lowROXMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

M-PCR-373L 10 x 1,25 ml
EUR 720.29
Description: qPCR SybrMaster lowROXMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

qPCR SybrMaster lowROXMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

M-PCR-373S 2 x 1,25 ml
EUR 180.14
Description: qPCR SybrMaster lowROXMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

qPCR SybrMaster highROXMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

M-PCR-374L 10 x 1,25 ml
EUR 720.29
Description: qPCR SybrMaster highROXMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

qPCR SybrMaster highROXMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

M-PCR-374S 2 x 1,25 ml
EUR 180.14
Description: qPCR SybrMaster highROXMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

qPCR SybrMaster UNGMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

M-PCR-375L 10 x 1,25 ml
EUR 864.5
Description: qPCR SybrMaster UNGMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

qPCR SybrMaster UNGMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

M-PCR-375S 2 x 1,25 ml
EUR 216.19
Description: qPCR SybrMaster UNGMaster mix for real-time qPCR with SYBR® Green fluorescent DNA stain** shipped ice packs - must be shipped via overnight service

Seamless cloning Master Mix (Kit)

B632219 40RXN, 40prep
EUR 319.96

Future work will prolong the design pipeline to bigger and extra advanced panels, enabling fast creation of single-tube focused sequencing assays for quite a lot of functions.

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